WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D8.1e.1 Sequence Name  C09D8.1e.1
Length (nt)  6457   Chromosome Location  II: 10983030-11012241
Chromosome . Primary Identifier  II Chromosome Location . Start  10983030
Chromosome Location . End  11012241 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D8.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004215 ptp-3 C09D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1e C09D8.1e 5958   II: 10983070-10983217

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D8.1e.1 10983030 11012241 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67592   188   II: 10983030-10983217 Caenorhabditis elegans
Exon67598   135   II: 10983267-10983401 Caenorhabditis elegans
Exon67608   141   II: 10983794-10983934 Caenorhabditis elegans
Exon67618   124   II: 10983998-10984121 Caenorhabditis elegans
Exon67633   85   II: 10984385-10984469 Caenorhabditis elegans
Exon67643   246   II: 10984517-10984762 Caenorhabditis elegans
Exon67653   142   II: 10985022-10985163 Caenorhabditis elegans
Exon67663   208   II: 10985213-10985420 Caenorhabditis elegans
Exon67673   71   II: 10985485-10985555 Caenorhabditis elegans
Exon67683   360   II: 10985677-10986036 Caenorhabditis elegans
Exon67704   50   II: 10993895-10993944 Caenorhabditis elegans
Exon67715   265   II: 10994145-10994409 Caenorhabditis elegans
Exon67726   213   II: 10995024-10995236 Caenorhabditis elegans
Exon67737   143   II: 10995310-10995452 Caenorhabditis elegans
Exon67748   111   II: 10996164-10996274 Caenorhabditis elegans
Exon67760   133   II: 10998998-10999130 Caenorhabditis elegans
Exon67775   86   II: 11006751-11006836 Caenorhabditis elegans
Exon67788   177   II: 11007016-11007192 Caenorhabditis elegans
Exon67802   516   II: 11007310-11007825 Caenorhabditis elegans
Exon67816   276   II: 11007889-11008164 Caenorhabditis elegans
Exon67830   99   II: 11009181-11009279 Caenorhabditis elegans
Exon67844   1619   II: 11009368-11010986 Caenorhabditis elegans
Exon67858   253   II: 11011040-11011292 Caenorhabditis elegans
Exon67872   246   II: 11011373-11011618 Caenorhabditis elegans
Exon67890   570   II: 11011672-11012241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D8.1e.1 10983030 11012241 1

1 Sequence

Length
6457

1 Sequence Ontology Term

Identifier Name Description
transcript