WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D8.1i.1 Sequence Name  C09D8.1i.1
Length (nt)  6675   Chromosome Location  II: 10975569-11011782
Chromosome . Primary Identifier  II Chromosome Location . Start  10975569
Chromosome Location . End  11011782 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D8.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004215 ptp-3 C09D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1i C09D8.1i 6675   II: 10975569-10975836

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1i.1 10975569 11011782 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67570   268   II: 10975569-10975836 Caenorhabditis elegans
Exon67574   142   II: 10976186-10976327 Caenorhabditis elegans
Exon67580   241   II: 10976373-10976613 Caenorhabditis elegans
Exon67586   214   II: 10977017-10977230 Caenorhabditis elegans
Exon67600   135   II: 10983267-10983401 Caenorhabditis elegans
Exon67610   141   II: 10983794-10983934 Caenorhabditis elegans
Exon67620   124   II: 10983998-10984121 Caenorhabditis elegans
Exon67635   85   II: 10984385-10984469 Caenorhabditis elegans
Exon67645   246   II: 10984517-10984762 Caenorhabditis elegans
Exon67655   142   II: 10985022-10985163 Caenorhabditis elegans
Exon67665   208   II: 10985213-10985420 Caenorhabditis elegans
Exon67675   71   II: 10985485-10985555 Caenorhabditis elegans
Exon67685   360   II: 10985677-10986036 Caenorhabditis elegans
Exon67706   50   II: 10993895-10993944 Caenorhabditis elegans
Exon67717   265   II: 10994145-10994409 Caenorhabditis elegans
Exon67728   213   II: 10995024-10995236 Caenorhabditis elegans
Exon67739   143   II: 10995310-10995452 Caenorhabditis elegans
Exon67750   111   II: 10996164-10996274 Caenorhabditis elegans
Exon67762   133   II: 10998998-10999130 Caenorhabditis elegans
Exon67778   86   II: 11006751-11006836 Caenorhabditis elegans
Exon67791   177   II: 11007016-11007192 Caenorhabditis elegans
Exon67806   516   II: 11007310-11007825 Caenorhabditis elegans
Exon67820   276   II: 11007889-11008164 Caenorhabditis elegans
Exon67834   99   II: 11009181-11009279 Caenorhabditis elegans
Exon67848   1619   II: 11009368-11010986 Caenorhabditis elegans
Exon67862   253   II: 11011040-11011292 Caenorhabditis elegans
Exon67876   246   II: 11011373-11011618 Caenorhabditis elegans
Exon67885   111   II: 11011672-11011782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1i.1 10975569 11011782 1

1 Sequence

Length
6675

1 Sequence Ontology Term

Identifier Name Description
transcript