WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2089.4a.1 Sequence Name  D2089.4a.1
Length (nt)  2396   Chromosome Location  II: 10675602-10690282
Chromosome . Primary Identifier  II Chromosome Location . Start  10675602
Chromosome Location . End  10690282 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2089.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004207 ptb-1 D2089.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2089.4a D2089.4a 1848   II: 10675658-10675666

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2089.4a.1 10675602 10690282 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66751   65   II: 10675602-10675666 Caenorhabditis elegans
Exon66752   285   II: 10677590-10677874 Caenorhabditis elegans
Exon66753   69   II: 10678387-10678455 Caenorhabditis elegans
Exon66754   111   II: 10678758-10678868 Caenorhabditis elegans
Exon66755   72   II: 10678993-10679064 Caenorhabditis elegans
Exon66756   84   II: 10679736-10679819 Caenorhabditis elegans
Exon66759   172   II: 10686756-10686927 Caenorhabditis elegans
Exon66761   222   II: 10687114-10687335 Caenorhabditis elegans
Exon66763   126   II: 10687381-10687506 Caenorhabditis elegans
Exon66765   143   II: 10687898-10688040 Caenorhabditis elegans
Exon66767   34   II: 10688477-10688510 Caenorhabditis elegans
Exon66769   93   II: 10688758-10688850 Caenorhabditis elegans
Exon66771   295   II: 10688918-10689212 Caenorhabditis elegans
Exon66774   625   II: 10689658-10690282 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2089.4a.1 10675602 10690282 1

1 Sequence

Length
2396

1 Sequence Ontology Term

Identifier Name Description
transcript