Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:M28.13 | M28.13 |
212
 |
II: 10658897-10659108 |
Other
10 Allele
| Public Name |
|---|
| gk963801 |
| gk963053 |
| gk962682 |
| gk963998 |
| gk588733 |
| gk549065 |
| tm3405 |
| WBVar01935480 |
| tm5245 |
| tm6148 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00197065 | 10658897 | 10659108 | 1 |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum | Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. | GFold3, logFC < -1 or > 1. | WBPaper00066703:L.plantarum-pdxH_downregulated |
| Bacteria: C.neoformans strain H99 | Transcripts that showed significantly increased expression after infection by C. neoformans H99. | Ballgown was used to calculate differential expression of genes using FPKM data and to generate tables with fold change and P values. Genes were shortlisted with a cutoff of 2-fold change and P values of less than 0.05. | WBPaper00059754:C.neoformans_H99_upregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrII_10658627..10658896 | 270 | II: 10658627-10658896 | Caenorhabditis elegans |
