WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27E5.2.1 Sequence Name  F27E5.2.1
Length (nt)  1625   Chromosome Location  II: 10146570-10152865
Chromosome . Primary Identifier  II Chromosome Location . Start  10146570
Chromosome Location . End  10152865 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27E5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003939 pax-3 F27E5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27E5.2 F27E5.2 927   II: 10146848-10146889

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F27E5.2.1 10146570 10152865 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65646   320   II: 10146570-10146889 Caenorhabditis elegans
Exon65647   98   II: 10147320-10147417 Caenorhabditis elegans
Exon65648   97   II: 10147463-10147559 Caenorhabditis elegans
Exon65649   184   II: 10148258-10148441 Caenorhabditis elegans
Exon65650   75   II: 10148851-10148925 Caenorhabditis elegans
Exon65651   290   II: 10151956-10152245 Caenorhabditis elegans
Exon65652   561   II: 10152305-10152865 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F27E5.2.1 10146570 10152865 1

1 Sequence

Length
1625

1 Sequence Ontology Term

Identifier Name Description
transcript