WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08H9.3a.1 Sequence Name  C08H9.3a.1
Length (nt)  2423   Chromosome Location  II: 9882730-9886442
Chromosome . Primary Identifier  II Chromosome Location . Start  9882730
Chromosome Location . End  9886442 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08H9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007464 algn-8 C08H9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08H9.3a C08H9.3a 2301   II: 9882848-9883015

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08H9.3a.1 9882730 9886442 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64845   286   II: 9882730-9883015 Caenorhabditis elegans
Exon64846   93   II: 9883064-9883156 Caenorhabditis elegans
Exon64847   630   II: 9883205-9883834 Caenorhabditis elegans
Exon64848   103   II: 9884049-9884151 Caenorhabditis elegans
Exon64849   143   II: 9884201-9884343 Caenorhabditis elegans
Exon64850   122   II: 9884480-9884601 Caenorhabditis elegans
Exon64851   106   II: 9884651-9884756 Caenorhabditis elegans
Exon64852   254   II: 9884802-9885055 Caenorhabditis elegans
Exon64853   133   II: 9885106-9885238 Caenorhabditis elegans
Exon64855   216   II: 9885309-9885524 Caenorhabditis elegans
Exon64857   97   II: 9886021-9886117 Caenorhabditis elegans
Exon64859   143   II: 9886161-9886303 Caenorhabditis elegans
Exon64861   97   II: 9886346-9886442 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08H9.3a.1 9882730 9886442 -1

1 Sequence

Length
2423

1 Sequence Ontology Term

Identifier Name Description
transcript