WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1321.2c.1 Sequence Name  ZK1321.2c.1
Length (nt)  1611   Chromosome Location  II: 9758254-9767987
Chromosome . Primary Identifier  II Chromosome Location . Start  9758254
Chromosome Location . End  9767987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1321.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014261 shk-1 ZK1321.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1321.2c ZK1321.2c 1611   II: 9758254-9758378

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1321.2c.1 9758254 9767987 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64506   125   II: 9758254-9758378 Caenorhabditis elegans
Exon64509   129   II: 9761951-9762079 Caenorhabditis elegans
Exon64514   120   II: 9765426-9765545 Caenorhabditis elegans
Exon64520   84   II: 9765687-9765770 Caenorhabditis elegans
Exon64526   93   II: 9765815-9765907 Caenorhabditis elegans
Exon64530   36   II: 9766056-9766091 Caenorhabditis elegans
Exon64534   100   II: 9766352-9766451 Caenorhabditis elegans
Exon64540   173   II: 9766607-9766779 Caenorhabditis elegans
Exon64546   158   II: 9766830-9766987 Caenorhabditis elegans
Exon64552   109   II: 9767032-9767140 Caenorhabditis elegans
Exon64558   93   II: 9767187-9767279 Caenorhabditis elegans
Exon64564   181   II: 9767328-9767508 Caenorhabditis elegans
Exon64570   20   II: 9767594-9767613 Caenorhabditis elegans
Exon64576   100   II: 9767724-9767823 Caenorhabditis elegans
Exon64580   90   II: 9767898-9767987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1321.2c.1 9758254 9767987 1

1 Sequence

Length
1611

1 Sequence Ontology Term

Identifier Name Description
transcript