WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06C3.8a.1 Sequence Name  C06C3.8a.1
Length (nt)  1790   Chromosome Location  II: 9386538-9390900
Chromosome . Primary Identifier  II Chromosome Location . Start  9386538
Chromosome Location . End  9390900 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06C3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007378 lido-17 C06C3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06C3.8a C06C3.8a 1740   II: 9386588-9386770

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06C3.8a.1 9386538 9390900 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63628   233   II: 9386538-9386770 Caenorhabditis elegans
Exon63632   130   II: 9386816-9386945 Caenorhabditis elegans
Exon63636   328   II: 9387049-9387376 Caenorhabditis elegans
Exon63641   305   II: 9387945-9388249 Caenorhabditis elegans
Exon63645   62   II: 9388296-9388357 Caenorhabditis elegans
Exon63648   99   II: 9388755-9388853 Caenorhabditis elegans
Exon63651   99   II: 9389095-9389193 Caenorhabditis elegans
Exon63654   126   II: 9389268-9389393 Caenorhabditis elegans
Exon63657   159   II: 9390005-9390163 Caenorhabditis elegans
Exon63660   249   II: 9390652-9390900 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06C3.8a.1 9386538 9390900 -1

1 Sequence

Length
1790

1 Sequence Ontology Term

Identifier Name Description
transcript