WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44G4.8a.1 Sequence Name  F44G4.8a.1
Length (nt)  4510   Chromosome Location  II: 9005796-9019798
Chromosome . Primary Identifier  II Chromosome Location . Start  9005796
Chromosome Location . End  9019798 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44G4.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009717 dep-1 F44G4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44G4.8a F44G4.8a 4104   II: 9006171-9006311

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F44G4.8a.1 9005796 9019798 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62437   516   II: 9005796-9006311 Caenorhabditis elegans
Exon62439   136   II: 9006576-9006711 Caenorhabditis elegans
Exon62441   230   II: 9006765-9006994 Caenorhabditis elegans
Exon62443   451   II: 9007043-9007493 Caenorhabditis elegans
Exon62446   357   II: 9007703-9008059 Caenorhabditis elegans
Exon62447   118   II: 9009074-9009191 Caenorhabditis elegans
Exon62448   256   II: 9015415-9015670 Caenorhabditis elegans
Exon62449   76   II: 9015749-9015824 Caenorhabditis elegans
Exon62450   397   II: 9016356-9016752 Caenorhabditis elegans
Exon62451   652   II: 9016798-9017449 Caenorhabditis elegans
Exon62452   148   II: 9017530-9017677 Caenorhabditis elegans
Exon62453   155   II: 9017724-9017878 Caenorhabditis elegans
Exon62454   159   II: 9018007-9018165 Caenorhabditis elegans
Exon62455   143   II: 9018326-9018468 Caenorhabditis elegans
Exon62456   196   II: 9018514-9018709 Caenorhabditis elegans
Exon62457   163   II: 9018754-9018916 Caenorhabditis elegans
Exon62458   99   II: 9019382-9019480 Caenorhabditis elegans
Exon62459   258   II: 9019541-9019798 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F44G4.8a.1 9005796 9019798 -1

1 Sequence

Length
4510

1 Sequence Ontology Term

Identifier Name Description
transcript