WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07D4.3b.1 Sequence Name  T07D4.3b.1
Length (nt)  3909   Chromosome Location  II: 8878496-8883659
Chromosome . Primary Identifier  II Chromosome Location . Start  8878496
Chromosome Location . End  8883659 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004355 rha-1 T07D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07D4.3b T07D4.3b 3786   II: 8878619-8878782

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07D4.3b.1 8878496 8883659 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62042   287   II: 8878496-8878782 Caenorhabditis elegans
Exon62045   33   II: 8879399-8879431 Caenorhabditis elegans
Exon62047   64   II: 8879481-8879544 Caenorhabditis elegans
Exon62049   217   II: 8879591-8879807 Caenorhabditis elegans
Exon62051   408   II: 8879858-8880265 Caenorhabditis elegans
Exon62053   675   II: 8880324-8880998 Caenorhabditis elegans
Exon62055   169   II: 8881044-8881212 Caenorhabditis elegans
Exon62057   345   II: 8881258-8881602 Caenorhabditis elegans
Exon62059   175   II: 8881652-8881826 Caenorhabditis elegans
Exon62061   489   II: 8881873-8882361 Caenorhabditis elegans
Exon62063   261   II: 8882410-8882670 Caenorhabditis elegans
Exon62065   137   II: 8882723-8882859 Caenorhabditis elegans
Exon62067   47   II: 8882911-8882957 Caenorhabditis elegans
Exon62069   431   II: 8883015-8883445 Caenorhabditis elegans
Exon62071   171   II: 8883489-8883659 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07D4.3b.1 8878496 8883659 -1

1 Sequence

Length
3909

1 Sequence Ontology Term

Identifier Name Description
transcript