WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C5.6.1 Sequence Name  F46C5.6.1
Length (nt)  2937   Chromosome Location  II: 8840200-8844515
Chromosome . Primary Identifier  II Chromosome Location . Start  8840200
Chromosome Location . End  8844515 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009781 F46C5.6 F46C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C5.6 F46C5.6 2838   II: 8840270-8840846

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46C5.6.1 8840200 8844515 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61959   647   II: 8840200-8840846 Caenorhabditis elegans
Exon61960   209   II: 8840896-8841104 Caenorhabditis elegans
Exon61961   296   II: 8841157-8841452 Caenorhabditis elegans
Exon61962   106   II: 8841573-8841678 Caenorhabditis elegans
Exon61963   183   II: 8841853-8842035 Caenorhabditis elegans
Exon61964   191   II: 8842080-8842270 Caenorhabditis elegans
Exon61965   333   II: 8842374-8842706 Caenorhabditis elegans
Exon61966   125   II: 8842756-8842880 Caenorhabditis elegans
Exon61967   108   II: 8842930-8843037 Caenorhabditis elegans
Exon61968   107   II: 8843162-8843268 Caenorhabditis elegans
Exon61969   74   II: 8843310-8843383 Caenorhabditis elegans
Exon61970   66   II: 8843563-8843628 Caenorhabditis elegans
Exon61971   62   II: 8843705-8843766 Caenorhabditis elegans
Exon61972   207   II: 8843813-8844019 Caenorhabditis elegans
Exon61973   146   II: 8844103-8844248 Caenorhabditis elegans
Exon61974   77   II: 8844439-8844515 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46C5.6.1 8840200 8844515 -1

1 Sequence

Length
2937

1 Sequence Ontology Term

Identifier Name Description
transcript