WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34C6.5b.1 Sequence Name  C34C6.5b.1
Length (nt)  1272   Chromosome Location  II: 8699330-8701518
Chromosome . Primary Identifier  II Chromosome Location . Start  8699330
Chromosome Location . End  8701518 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34C6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007918 sphk-1 C34C6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34C6.5b C34C6.5b 1272   II: 8699330-8699470

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34C6.5b.1 8699330 8701518 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61548   141   II: 8699330-8699470 Caenorhabditis elegans
Exon61550   348   II: 8699517-8699864 Caenorhabditis elegans
Exon61554   107   II: 8699968-8700074 Caenorhabditis elegans
Exon61558   352   II: 8700122-8700473 Caenorhabditis elegans
Exon61563   98   II: 8700601-8700698 Caenorhabditis elegans
Exon61566   132   II: 8700750-8700881 Caenorhabditis elegans
Exon61569   94   II: 8701425-8701518 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34C6.5b.1 8699330 8701518 -1

1 Sequence

Length
1272

1 Sequence Ontology Term

Identifier Name Description
transcript