WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34C6.5a.1 Sequence Name  C34C6.5a.1
Length (nt)  1741   Chromosome Location  II: 8699012-8701669
Chromosome . Primary Identifier  II Chromosome Location . Start  8699012
Chromosome Location . End  8701669 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34C6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007918 sphk-1 C34C6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34C6.5a C34C6.5a 1422   II: 8699330-8699470

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34C6.5a.1 8699012 8701669 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61545   459   II: 8699012-8699470 Caenorhabditis elegans
Exon61549   348   II: 8699517-8699864 Caenorhabditis elegans
Exon61553   107   II: 8699968-8700074 Caenorhabditis elegans
Exon61557   352   II: 8700122-8700473 Caenorhabditis elegans
Exon61562   98   II: 8700601-8700698 Caenorhabditis elegans
Exon61565   132   II: 8700750-8700881 Caenorhabditis elegans
Exon61570   245   II: 8701425-8701669 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34C6.5a.1 8699012 8701669 -1

1 Sequence

Length
1741

1 Sequence Ontology Term

Identifier Name Description
transcript