WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.5k.1 Sequence Name  D2085.5k.1
Length (nt)  5253   Chromosome Location  II: 8669353-8684897
Chromosome . Primary Identifier  II Chromosome Location . Start  8669353
Chromosome Location . End  8684897 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.5k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008430 hgap-2 D2085.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.5k D2085.5k 5253   II: 8669353-8669461

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5k.1 8669353 8684897 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61138   109   II: 8669353-8669461 Caenorhabditis elegans
Exon61159   117   II: 8669511-8669627 Caenorhabditis elegans
Exon61182   166   II: 8669683-8669848 Caenorhabditis elegans
Exon61205   429   II: 8670176-8670604 Caenorhabditis elegans
Exon61228   248   II: 8670660-8670907 Caenorhabditis elegans
Exon61251   270   II: 8671360-8671629 Caenorhabditis elegans
Exon61274   82   II: 8671676-8671757 Caenorhabditis elegans
Exon61311   418   II: 8672707-8673124 Caenorhabditis elegans
Exon61334   123   II: 8673173-8673295 Caenorhabditis elegans
Exon61357   104   II: 8673617-8673720 Caenorhabditis elegans
Exon61380   399   II: 8673773-8674171 Caenorhabditis elegans
Exon61403   477   II: 8674225-8674701 Caenorhabditis elegans
Exon61425   138   II: 8674868-8675005 Caenorhabditis elegans
Exon61448   174   II: 8680279-8680452 Caenorhabditis elegans
Exon61454   132   II: 8680515-8680646 Caenorhabditis elegans
Exon61462   433   II: 8680690-8681122 Caenorhabditis elegans
Exon61470   248   II: 8681420-8681667 Caenorhabditis elegans
Exon61478   159   II: 8681726-8681884 Caenorhabditis elegans
Exon61486   97   II: 8682029-8682125 Caenorhabditis elegans
Exon61494   488   II: 8682175-8682662 Caenorhabditis elegans
Exon61502   179   II: 8682978-8683156 Caenorhabditis elegans
Exon61508   86   II: 8683208-8683293 Caenorhabditis elegans
Exon61515   126   II: 8684275-8684400 Caenorhabditis elegans
Exon61517   51   II: 8684847-8684897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5k.1 8669353 8684897 -1

1 Sequence

Length
5253

1 Sequence Ontology Term

Identifier Name Description
transcript