WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.5l.1 Sequence Name  D2085.5l.1
Length (nt)  5229   Chromosome Location  II: 8669353-8684427
Chromosome . Primary Identifier  II Chromosome Location . Start  8669353
Chromosome Location . End  8684427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.5l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008430 hgap-2 D2085.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.5l D2085.5l 5229   II: 8669353-8669461

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5l.1 8669353 8684427 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61137   109   II: 8669353-8669461 Caenorhabditis elegans
Exon61160   117   II: 8669511-8669627 Caenorhabditis elegans
Exon61183   166   II: 8669683-8669848 Caenorhabditis elegans
Exon61206   429   II: 8670176-8670604 Caenorhabditis elegans
Exon61229   248   II: 8670660-8670907 Caenorhabditis elegans
Exon61252   270   II: 8671360-8671629 Caenorhabditis elegans
Exon61275   82   II: 8671676-8671757 Caenorhabditis elegans
Exon61312   418   II: 8672707-8673124 Caenorhabditis elegans
Exon61335   123   II: 8673173-8673295 Caenorhabditis elegans
Exon61358   104   II: 8673617-8673720 Caenorhabditis elegans
Exon61381   399   II: 8673773-8674171 Caenorhabditis elegans
Exon61404   477   II: 8674225-8674701 Caenorhabditis elegans
Exon61426   138   II: 8674868-8675005 Caenorhabditis elegans
Exon61449   174   II: 8680279-8680452 Caenorhabditis elegans
Exon61455   132   II: 8680515-8680646 Caenorhabditis elegans
Exon61463   433   II: 8680690-8681122 Caenorhabditis elegans
Exon61471   248   II: 8681420-8681667 Caenorhabditis elegans
Exon61479   159   II: 8681726-8681884 Caenorhabditis elegans
Exon61487   97   II: 8682029-8682125 Caenorhabditis elegans
Exon61495   488   II: 8682175-8682662 Caenorhabditis elegans
Exon61503   179   II: 8682978-8683156 Caenorhabditis elegans
Exon61509   86   II: 8683208-8683293 Caenorhabditis elegans
Exon61516   153   II: 8684275-8684427 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5l.1 8669353 8684427 -1

1 Sequence

Length
5229

1 Sequence Ontology Term

Identifier Name Description
transcript