WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.5m.1 Sequence Name  D2085.5m.1
Length (nt)  5058   Chromosome Location  II: 8669353-8683275
Chromosome . Primary Identifier  II Chromosome Location . Start  8669353
Chromosome Location . End  8683275 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.5m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008430 hgap-2 D2085.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.5m D2085.5m 5058   II: 8669353-8669461

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5m.1 8669353 8683275 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61136   109   II: 8669353-8669461 Caenorhabditis elegans
Exon61161   117   II: 8669511-8669627 Caenorhabditis elegans
Exon61184   166   II: 8669683-8669848 Caenorhabditis elegans
Exon61207   429   II: 8670176-8670604 Caenorhabditis elegans
Exon61230   248   II: 8670660-8670907 Caenorhabditis elegans
Exon61253   270   II: 8671360-8671629 Caenorhabditis elegans
Exon61276   82   II: 8671676-8671757 Caenorhabditis elegans
Exon61313   418   II: 8672707-8673124 Caenorhabditis elegans
Exon61336   123   II: 8673173-8673295 Caenorhabditis elegans
Exon61359   104   II: 8673617-8673720 Caenorhabditis elegans
Exon61382   399   II: 8673773-8674171 Caenorhabditis elegans
Exon61405   477   II: 8674225-8674701 Caenorhabditis elegans
Exon61427   138   II: 8674868-8675005 Caenorhabditis elegans
Exon61450   174   II: 8680279-8680452 Caenorhabditis elegans
Exon61456   132   II: 8680515-8680646 Caenorhabditis elegans
Exon61464   433   II: 8680690-8681122 Caenorhabditis elegans
Exon61472   248   II: 8681420-8681667 Caenorhabditis elegans
Exon61480   159   II: 8681726-8681884 Caenorhabditis elegans
Exon61488   97   II: 8682029-8682125 Caenorhabditis elegans
Exon61496   488   II: 8682175-8682662 Caenorhabditis elegans
Exon61504   179   II: 8682978-8683156 Caenorhabditis elegans
Exon61505   68   II: 8683208-8683275 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5m.1 8669353 8683275 -1

1 Sequence

Length
5058

1 Sequence Ontology Term

Identifier Name Description
transcript