WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.5f.1 Sequence Name  D2085.5f.1
Length (nt)  3090   Chromosome Location  II: 8669353-8676384
Chromosome . Primary Identifier  II Chromosome Location . Start  8669353
Chromosome Location . End  8676384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.5f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008430 hgap-2 D2085.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.5f D2085.5f 3090   II: 8669353-8669461

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2085.5f.1 8669353 8676384 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61130   109   II: 8669353-8669461 Caenorhabditis elegans
Exon61152   117   II: 8669511-8669627 Caenorhabditis elegans
Exon61175   166   II: 8669683-8669848 Caenorhabditis elegans
Exon61198   429   II: 8670176-8670604 Caenorhabditis elegans
Exon61221   248   II: 8670660-8670907 Caenorhabditis elegans
Exon61244   270   II: 8671360-8671629 Caenorhabditis elegans
Exon61267   82   II: 8671676-8671757 Caenorhabditis elegans
Exon61304   418   II: 8672707-8673124 Caenorhabditis elegans
Exon61327   123   II: 8673173-8673295 Caenorhabditis elegans
Exon61350   104   II: 8673617-8673720 Caenorhabditis elegans
Exon61373   399   II: 8673773-8674171 Caenorhabditis elegans
Exon61396   477   II: 8674225-8674701 Caenorhabditis elegans
Exon61418   138   II: 8674868-8675005 Caenorhabditis elegans
Exon61432   10   II: 8676375-8676384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2085.5f.1 8669353 8676384 -1

1 Sequence

Length
3090

1 Sequence Ontology Term

Identifier Name Description
transcript