WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.5b.4 Sequence Name  D2085.5b.4
Length (nt)  5337   Chromosome Location  II: 8669137-8683295
Chromosome . Primary Identifier  II Chromosome Location . Start  8669137
Chromosome Location . End  8683295 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.5b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008430 hgap-2 D2085.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.5b D2085.5b 3024   II: 8669353-8669461

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5b.4 8669137 8683295 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61126   325   II: 8669137-8669461 Caenorhabditis elegans
Exon61143   117   II: 8669511-8669627 Caenorhabditis elegans
Exon61166   166   II: 8669683-8669848 Caenorhabditis elegans
Exon61189   429   II: 8670176-8670604 Caenorhabditis elegans
Exon61212   248   II: 8670660-8670907 Caenorhabditis elegans
Exon61235   270   II: 8671360-8671629 Caenorhabditis elegans
Exon61258   82   II: 8671676-8671757 Caenorhabditis elegans
Exon61295   418   II: 8672707-8673124 Caenorhabditis elegans
Exon61318   123   II: 8673173-8673295 Caenorhabditis elegans
Exon61341   104   II: 8673617-8673720 Caenorhabditis elegans
Exon61364   399   II: 8673773-8674171 Caenorhabditis elegans
Exon61387   477   II: 8674225-8674701 Caenorhabditis elegans
Exon61410   138   II: 8674868-8675005 Caenorhabditis elegans
Exon61446   174   II: 8680279-8680452 Caenorhabditis elegans
Exon61458   608   II: 8680515-8681122 Caenorhabditis elegans
Exon61468   248   II: 8681420-8681667 Caenorhabditis elegans
Exon61476   159   II: 8681726-8681884 Caenorhabditis elegans
Exon61484   97   II: 8682029-8682125 Caenorhabditis elegans
Exon61492   488   II: 8682175-8682662 Caenorhabditis elegans
Exon61500   179   II: 8682978-8683156 Caenorhabditis elegans
Exon61511   88   II: 8683208-8683295 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5b.4 8669137 8683295 -1

1 Sequence

Length
5337

1 Sequence Ontology Term

Identifier Name Description
transcript