WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.5g.1 Sequence Name  D2085.5g.1
Length (nt)  5568   Chromosome Location  II: 8669136-8683295
Chromosome . Primary Identifier  II Chromosome Location . Start  8669136
Chromosome Location . End  8683295 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.5g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008430 hgap-2 D2085.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.5g D2085.5g 3297   II: 8669353-8669461

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5g.1 8669136 8683295 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61123   326   II: 8669136-8669461 Caenorhabditis elegans
Exon61153   117   II: 8669511-8669627 Caenorhabditis elegans
Exon61176   166   II: 8669683-8669848 Caenorhabditis elegans
Exon61199   429   II: 8670176-8670604 Caenorhabditis elegans
Exon61222   248   II: 8670660-8670907 Caenorhabditis elegans
Exon61245   270   II: 8671360-8671629 Caenorhabditis elegans
Exon61268   82   II: 8671676-8671757 Caenorhabditis elegans
Exon61279   156   II: 8672050-8672205 Caenorhabditis elegans
Exon61286   117   II: 8672253-8672369 Caenorhabditis elegans
Exon61305   418   II: 8672707-8673124 Caenorhabditis elegans
Exon61328   123   II: 8673173-8673295 Caenorhabditis elegans
Exon61351   104   II: 8673617-8673720 Caenorhabditis elegans
Exon61374   399   II: 8673773-8674171 Caenorhabditis elegans
Exon61397   477   II: 8674225-8674701 Caenorhabditis elegans
Exon61419   138   II: 8674868-8675005 Caenorhabditis elegans
Exon61447   174   II: 8680279-8680452 Caenorhabditis elegans
Exon61453   132   II: 8680515-8680646 Caenorhabditis elegans
Exon61461   433   II: 8680690-8681122 Caenorhabditis elegans
Exon61469   248   II: 8681420-8681667 Caenorhabditis elegans
Exon61477   159   II: 8681726-8681884 Caenorhabditis elegans
Exon61485   97   II: 8682029-8682125 Caenorhabditis elegans
Exon61493   488   II: 8682175-8682662 Caenorhabditis elegans
Exon61501   179   II: 8682978-8683156 Caenorhabditis elegans
Exon61512   88   II: 8683208-8683295 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5g.1 8669136 8683295 -1

1 Sequence

Length
5568

1 Sequence Ontology Term

Identifier Name Description
transcript