WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.5b.3 Sequence Name  D2085.5b.3
Length (nt)  5295   Chromosome Location  II: 8669136-8683295
Chromosome . Primary Identifier  II Chromosome Location . Start  8669136
Chromosome Location . End  8683295 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.5b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008430 hgap-2 D2085.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.5b D2085.5b 3024   II: 8669353-8669461

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5b.3 8669136 8683295 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61122   326   II: 8669136-8669461 Caenorhabditis elegans
Exon61142   117   II: 8669511-8669627 Caenorhabditis elegans
Exon61165   166   II: 8669683-8669848 Caenorhabditis elegans
Exon61188   429   II: 8670176-8670604 Caenorhabditis elegans
Exon61211   248   II: 8670660-8670907 Caenorhabditis elegans
Exon61234   270   II: 8671360-8671629 Caenorhabditis elegans
Exon61257   82   II: 8671676-8671757 Caenorhabditis elegans
Exon61294   418   II: 8672707-8673124 Caenorhabditis elegans
Exon61317   123   II: 8673173-8673295 Caenorhabditis elegans
Exon61340   104   II: 8673617-8673720 Caenorhabditis elegans
Exon61363   399   II: 8673773-8674171 Caenorhabditis elegans
Exon61386   477   II: 8674225-8674701 Caenorhabditis elegans
Exon61409   138   II: 8674868-8675005 Caenorhabditis elegans
Exon61445   174   II: 8680279-8680452 Caenorhabditis elegans
Exon61452   132   II: 8680515-8680646 Caenorhabditis elegans
Exon61460   433   II: 8680690-8681122 Caenorhabditis elegans
Exon61467   248   II: 8681420-8681667 Caenorhabditis elegans
Exon61475   159   II: 8681726-8681884 Caenorhabditis elegans
Exon61483   97   II: 8682029-8682125 Caenorhabditis elegans
Exon61491   488   II: 8682175-8682662 Caenorhabditis elegans
Exon61499   179   II: 8682978-8683156 Caenorhabditis elegans
Exon61510   88   II: 8683208-8683295 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D2085.5b.3 8669136 8683295 -1

1 Sequence

Length
5295

1 Sequence Ontology Term

Identifier Name Description
transcript