WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C9.2.1 Sequence Name  F54C9.2.1
Length (nt)  1655   Chromosome Location  II: 8563713-8566139
Chromosome . Primary Identifier  II Chromosome Location . Start  8563713
Chromosome Location . End  8566139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006059 stc-1 F54C9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C9.2 F54C9.2 1353   II: 8563983-8564175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54C9.2.1 8563713 8566139 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60822   463   II: 8563713-8564175 Caenorhabditis elegans
Exon60823   90   II: 8564609-8564698 Caenorhabditis elegans
Exon60824   367   II: 8564782-8565148 Caenorhabditis elegans
Exon60825   349   II: 8565193-8565541 Caenorhabditis elegans
Exon60826   127   II: 8565593-8565719 Caenorhabditis elegans
Exon60827   85   II: 8565773-8565857 Caenorhabditis elegans
Exon60828   114   II: 8565909-8566022 Caenorhabditis elegans
Exon60829   60   II: 8566080-8566139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54C9.2.1 8563713 8566139 -1

1 Sequence

Length
1655

1 Sequence Ontology Term

Identifier Name Description
transcript