WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E12.1.1 Sequence Name  F49E12.1.1
Length (nt)  2083   Chromosome Location  II: 8400299-8404848
Chromosome . Primary Identifier  II Chromosome Location . Start  8400299
Chromosome Location . End  8404848 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009897 skpo-1 F49E12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E12.1 F49E12.1 1968   II: 8400410-8400512

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E12.1.1 8400299 8404848 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60228   214   II: 8400299-8400512 Caenorhabditis elegans
Exon60229   209   II: 8401060-8401268 Caenorhabditis elegans
Exon60230   66   II: 8401316-8401381 Caenorhabditis elegans
Exon60231   58   II: 8401430-8401487 Caenorhabditis elegans
Exon60232   126   II: 8401987-8402112 Caenorhabditis elegans
Exon60233   186   II: 8402225-8402410 Caenorhabditis elegans
Exon60234   165   II: 8402639-8402803 Caenorhabditis elegans
Exon60235   125   II: 8402848-8402972 Caenorhabditis elegans
Exon60236   63   II: 8403021-8403083 Caenorhabditis elegans
Exon60237   109   II: 8403126-8403234 Caenorhabditis elegans
Exon60238   104   II: 8403280-8403383 Caenorhabditis elegans
Exon60239   110   II: 8403582-8403691 Caenorhabditis elegans
Exon60240   234   II: 8403899-8404132 Caenorhabditis elegans
Exon60241   148   II: 8404184-8404331 Caenorhabditis elegans
Exon60242   113   II: 8404375-8404487 Caenorhabditis elegans
Exon60243   53   II: 8404796-8404848 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E12.1.1 8400299 8404848 -1

1 Sequence

Length
2083

1 Sequence Ontology Term

Identifier Name Description
transcript