WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41C4.4a.1 Sequence Name  C41C4.4a.1
Length (nt)  3401   Chromosome Location  II: 8112243-8124910
Chromosome . Primary Identifier  II Chromosome Location . Start  8112243
Chromosome Location . End  8124910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41C4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002147 ire-1 C41C4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.4a C41C4.4a 2904   II: 8112670-8112843

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C41C4.4a.1 8112243 8124910 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59244   601   II: 8112243-8112843 Caenorhabditis elegans
Exon59246   75   II: 8112894-8112968 Caenorhabditis elegans
Exon59248   416   II: 8113020-8113435 Caenorhabditis elegans
Exon59250   1113   II: 8113484-8114596 Caenorhabditis elegans
Exon59253   325   II: 8114846-8115170 Caenorhabditis elegans
Exon59349   125   II: 8122911-8123035 Caenorhabditis elegans
Exon59350   241   II: 8124016-8124256 Caenorhabditis elegans
Exon59351   224   II: 8124305-8124528 Caenorhabditis elegans
Exon59352   124   II: 8124579-8124702 Caenorhabditis elegans
Exon59353   157   II: 8124754-8124910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C41C4.4a.1 8112243 8124910 -1

1 Sequence

Length
3401

1 Sequence Ontology Term

Identifier Name Description
transcript