WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02C4.3d.1 Sequence Name  K02C4.3d.1
Length (nt)  4206   Chromosome Location  II: 8080793-8086847
Chromosome . Primary Identifier  II Chromosome Location . Start  8080793
Chromosome Location . End  8086847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02C4.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010502 usp28 K02C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02C4.3d K02C4.3d 3777   II: 8081222-8081320

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02C4.3d.1 8080793 8086847 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59141   528   II: 8080793-8081320 Caenorhabditis elegans
Exon59146   213   II: 8081833-8082045 Caenorhabditis elegans
Exon59149   334   II: 8082098-8082431 Caenorhabditis elegans
Exon59157   335   II: 8082743-8083077 Caenorhabditis elegans
Exon59161   64   II: 8083629-8083692 Caenorhabditis elegans
Exon59165   637   II: 8083739-8084375 Caenorhabditis elegans
Exon59169   353   II: 8084536-8084888 Caenorhabditis elegans
Exon59173   445   II: 8084934-8085378 Caenorhabditis elegans
Exon59177   553   II: 8085427-8085979 Caenorhabditis elegans
Exon59181   585   II: 8086049-8086633 Caenorhabditis elegans
Exon59183   159   II: 8086689-8086847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02C4.3d.1 8080793 8086847 -1

1 Sequence

Length
4206

1 Sequence Ontology Term

Identifier Name Description
transcript