WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DH11.3.1 Sequence Name  DH11.3.1
Length (nt)  3980   Chromosome Location  II: 7995580-8004257
Chromosome . Primary Identifier  II Chromosome Location . Start  7995580
Chromosome Location . End  8004257 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DH11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004005 pgp-11 DH11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DH11.3 DH11.3 3726   II: 7995705-7995813

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:DH11.3.1 7995580 8004257 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58895   234   II: 7995580-7995813 Caenorhabditis elegans
Exon58897   236   II: 7995862-7996097 Caenorhabditis elegans
Exon58899   201   II: 7996259-7996459 Caenorhabditis elegans
Exon58901   474   II: 7996508-7996981 Caenorhabditis elegans
Exon58903   315   II: 7997032-7997346 Caenorhabditis elegans
Exon58905   162   II: 7997444-7997605 Caenorhabditis elegans
Exon58907   93   II: 7997652-7997744 Caenorhabditis elegans
Exon58909   495   II: 7997791-7998285 Caenorhabditis elegans
Exon58911   474   II: 7998341-7998814 Caenorhabditis elegans
Exon58913   286   II: 7998861-7999146 Caenorhabditis elegans
Exon58915   119   II: 7999255-7999373 Caenorhabditis elegans
Exon58917   123   II: 7999421-7999543 Caenorhabditis elegans
Exon58919   172   II: 7999610-7999781 Caenorhabditis elegans
Exon58921   230   II: 7999829-8000058 Caenorhabditis elegans
Exon58923   135   II: 8000107-8000241 Caenorhabditis elegans
Exon58925   175   II: 8000289-8000463 Caenorhabditis elegans
Exon58927   56   II: 8004202-8004257 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:DH11.3.1 7995580 8004257 -1

1 Sequence

Length
3980

1 Sequence Ontology Term

Identifier Name Description
transcript