WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09A5.12.1 Sequence Name  T09A5.12.1
Length (nt)  2741   Chromosome Location  II: 7866256-7870162
Chromosome . Primary Identifier  II Chromosome Location . Start  7866256
Chromosome Location . End  7870162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A5.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011639 ztf-17 T09A5.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09A5.12 T09A5.12 2118   II: 7866870-7867193

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09A5.12.1 7866256 7870162 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58514   938   II: 7866256-7867193 Caenorhabditis elegans
Exon58517   108   II: 7867582-7867689 Caenorhabditis elegans
Exon58519   68   II: 7867744-7867811 Caenorhabditis elegans
Exon58521   159   II: 7867857-7868015 Caenorhabditis elegans
Exon58523   76   II: 7868061-7868136 Caenorhabditis elegans
Exon58525   429   II: 7868184-7868612 Caenorhabditis elegans
Exon58527   148   II: 7868854-7869001 Caenorhabditis elegans
Exon58529   306   II: 7869046-7869351 Caenorhabditis elegans
Exon58531   111   II: 7869400-7869510 Caenorhabditis elegans
Exon58533   89   II: 7869564-7869652 Caenorhabditis elegans
Exon58535   153   II: 7869703-7869855 Caenorhabditis elegans
Exon58537   81   II: 7869903-7869983 Caenorhabditis elegans
Exon58539   75   II: 7870088-7870162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09A5.12.1 7866256 7870162 -1

1 Sequence

Length
2741

1 Sequence Ontology Term

Identifier Name Description
transcript