WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09A5.8.1 Sequence Name  T09A5.8.1
Length (nt)  1420   Chromosome Location  II: 7855810-7857600
Chromosome . Primary Identifier  II Chromosome Location . Start  7855810
Chromosome Location . End  7857600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011636 cec-3 T09A5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09A5.8 T09A5.8 1020   II: 7856079-7856140

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T09A5.8.1 7855810 7857600 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58489   331   II: 7855810-7856140 Caenorhabditis elegans
Exon58490   117   II: 7856184-7856300 Caenorhabditis elegans
Exon58491   73   II: 7856350-7856422 Caenorhabditis elegans
Exon58492   376   II: 7856473-7856848 Caenorhabditis elegans
Exon58493   266   II: 7856990-7857255 Caenorhabditis elegans
Exon58494   116   II: 7857300-7857415 Caenorhabditis elegans
Exon58495   141   II: 7857460-7857600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T09A5.8.1 7855810 7857600 -1

1 Sequence

Length
1420

1 Sequence Ontology Term

Identifier Name Description
transcript