WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09A5.2c.1 Sequence Name  T09A5.2c.1
Length (nt)  2080   Chromosome Location  II: 7842353-7845653
Chromosome . Primary Identifier  II Chromosome Location . Start  7842353
Chromosome Location . End  7845653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09A5.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002216 klp-3 T09A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09A5.2c T09A5.2c 1746   II: 7842417-7842473

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09A5.2c.1 7842353 7845653 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58409   121   II: 7842353-7842473 Caenorhabditis elegans
Exon58415   139   II: 7842650-7842788 Caenorhabditis elegans
Exon58419   157   II: 7843325-7843481 Caenorhabditis elegans
Exon58422   326   II: 7843616-7843941 Caenorhabditis elegans
Exon58427   287   II: 7844034-7844320 Caenorhabditis elegans
Exon58431   131   II: 7844369-7844499 Caenorhabditis elegans
Exon58435   142   II: 7844547-7844688 Caenorhabditis elegans
Exon58439   103   II: 7844732-7844834 Caenorhabditis elegans
Exon58443   198   II: 7844885-7845082 Caenorhabditis elegans
Exon58447   101   II: 7845131-7845231 Caenorhabditis elegans
Exon58451   375   II: 7845279-7845653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09A5.2c.1 7842353 7845653 1

1 Sequence

Length
2080

1 Sequence Ontology Term

Identifier Name Description
transcript