WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18A1.5.1 Sequence Name  F18A1.5.1
Length (nt)  2155   Chromosome Location  II: 7664582-7667110
Chromosome . Primary Identifier  II Chromosome Location . Start  7664582
Chromosome Location . End  7667110 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017546 rpa-1 F18A1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18A1.5 F18A1.5 1968   II: 7664592-7664675

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F18A1.5.1 7664582 7667110 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57789   94   II: 7664582-7664675 Caenorhabditis elegans
Exon57790   54   II: 7664728-7664781 Caenorhabditis elegans
Exon57791   82   II: 7664830-7664911 Caenorhabditis elegans
Exon57792   106   II: 7664956-7665061 Caenorhabditis elegans
Exon57793   245   II: 7665104-7665348 Caenorhabditis elegans
Exon57794   302   II: 7665391-7665692 Caenorhabditis elegans
Exon57795   96   II: 7665745-7665840 Caenorhabditis elegans
Exon57796   885   II: 7665890-7666774 Caenorhabditis elegans
Exon57797   291   II: 7666820-7667110 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F18A1.5.1 7664582 7667110 1

1 Sequence

Length
2155

1 Sequence Ontology Term

Identifier Name Description
transcript