WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18A1.6a.1 Sequence Name  F18A1.6a.1
Length (nt)  2511   Chromosome Location  II: 7658325-7662266
Chromosome . Primary Identifier  II Chromosome Location . Start  7658325
Chromosome Location . End  7662266 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A1.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017547 alfa-1 F18A1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18A1.6a F18A1.6a 2196   II: 7658485-7658809

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F18A1.6a.1 7658325 7662266 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57757   485   II: 7658325-7658809 Caenorhabditis elegans
Exon57760   203   II: 7659587-7659789 Caenorhabditis elegans
Exon57763   243   II: 7659838-7660080 Caenorhabditis elegans
Exon57766   111   II: 7660126-7660236 Caenorhabditis elegans
Exon57769   232   II: 7660283-7660514 Caenorhabditis elegans
Exon57772   298   II: 7660877-7661174 Caenorhabditis elegans
Exon57775   484   II: 7661223-7661706 Caenorhabditis elegans
Exon57778   264   II: 7661751-7662014 Caenorhabditis elegans
Exon57781   191   II: 7662076-7662266 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F18A1.6a.1 7658325 7662266 -1

1 Sequence

Length
2511

1 Sequence Ontology Term

Identifier Name Description
transcript