WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35D2.5a.1 Sequence Name  F35D2.5a.1
Length (nt)  3351   Chromosome Location  II: 7585697-7594912
Chromosome . Primary Identifier  II Chromosome Location . Start  7585697
Chromosome Location . End  7594912 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35D2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006363 syd-1 F35D2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35D2.5a F35D2.5a 2964   II: 7586080-7586162

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F35D2.5a.1 7585697 7594912 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon57460   466   II: 7585697-7586162 Caenorhabditis elegans
Exon57461   151   II: 7586704-7586854 Caenorhabditis elegans
Exon57464   356   II: 7586902-7587257 Caenorhabditis elegans
Exon57467   436   II: 7587325-7587760 Caenorhabditis elegans
Exon57470   479   II: 7587814-7588292 Caenorhabditis elegans
Exon57473   123   II: 7588587-7588709 Caenorhabditis elegans
Exon57476   268   II: 7588758-7589025 Caenorhabditis elegans
Exon57479   118   II: 7589177-7589294 Caenorhabditis elegans
Exon57482   155   II: 7589410-7589564 Caenorhabditis elegans
Exon57487   102   II: 7591134-7591235 Caenorhabditis elegans
Exon57489   79   II: 7591281-7591359 Caenorhabditis elegans
Exon57491   126   II: 7591402-7591527 Caenorhabditis elegans
Exon57493   150   II: 7591577-7591726 Caenorhabditis elegans
Exon57495   115   II: 7591771-7591885 Caenorhabditis elegans
Exon57497   43   II: 7591982-7592024 Caenorhabditis elegans
Exon57500   104   II: 7594567-7594670 Caenorhabditis elegans
Exon57501   80   II: 7594833-7594912 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F35D2.5a.1 7585697 7594912 -1

1 Sequence

Length
3351

1 Sequence Ontology Term

Identifier Name Description
transcript