WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E04F6.11h.1 Sequence Name  E04F6.11h.1
Length (nt)  3159   Chromosome Location  II: 7218412-7225192
Chromosome . Primary Identifier  II Chromosome Location . Start  7218412
Chromosome Location . End  7225192 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E04F6.11h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000530 clh-3 E04F6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E04F6.11h E04F6.11h 3159   II: 7218412-7218484

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:E04F6.11h.1 7218412 7225192 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56245   73   II: 7218412-7218484 Caenorhabditis elegans
Exon56259   245   II: 7218529-7218773 Caenorhabditis elegans
Exon56270   198   II: 7218842-7219039 Caenorhabditis elegans
Exon56282   87   II: 7219172-7219258 Caenorhabditis elegans
Exon56294   105   II: 7219304-7219408 Caenorhabditis elegans
Exon56298   42   II: 7219612-7219653 Caenorhabditis elegans
Exon56309   92   II: 7219732-7219823 Caenorhabditis elegans
Exon56320   209   II: 7219878-7220086 Caenorhabditis elegans
Exon56332   217   II: 7220133-7220349 Caenorhabditis elegans
Exon56343   253   II: 7220399-7220651 Caenorhabditis elegans
Exon56355   279   II: 7220700-7220978 Caenorhabditis elegans
Exon56368   201   II: 7221032-7221232 Caenorhabditis elegans
Exon56379   187   II: 7221271-7221457 Caenorhabditis elegans
Exon56391   374   II: 7221503-7221876 Caenorhabditis elegans
Exon56403   266   II: 7221931-7222196 Caenorhabditis elegans
Exon56415   120   II: 7222387-7222506 Caenorhabditis elegans
Exon56427   76   II: 7222561-7222636 Caenorhabditis elegans
Exon56439   96   II: 7222959-7223054 Caenorhabditis elegans
Exon56443   39   II: 7225154-7225192 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:E04F6.11h.1 7218412 7225192 -1

1 Sequence

Length
3159

1 Sequence Ontology Term

Identifier Name Description
transcript