WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E04F6.11a.3 Sequence Name  E04F6.11a.3
Length (nt)  3702   Chromosome Location  II: 7217943-7225662
Chromosome . Primary Identifier  II Chromosome Location . Start  7217943
Chromosome Location . End  7225662 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E04F6.11a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000530 clh-3 E04F6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E04F6.11a E04F6.11a 3006   II: 7218412-7218478

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:E04F6.11a.3 7217943 7225662 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56239   536   II: 7217943-7218478 Caenorhabditis elegans
Exon56252   245   II: 7218529-7218773 Caenorhabditis elegans
Exon56263   198   II: 7218842-7219039 Caenorhabditis elegans
Exon56275   87   II: 7219172-7219258 Caenorhabditis elegans
Exon56287   105   II: 7219304-7219408 Caenorhabditis elegans
Exon56302   92   II: 7219732-7219823 Caenorhabditis elegans
Exon56313   209   II: 7219878-7220086 Caenorhabditis elegans
Exon56325   217   II: 7220133-7220349 Caenorhabditis elegans
Exon56336   253   II: 7220399-7220651 Caenorhabditis elegans
Exon56348   279   II: 7220700-7220978 Caenorhabditis elegans
Exon56360   192   II: 7221032-7221223 Caenorhabditis elegans
Exon56372   187   II: 7221271-7221457 Caenorhabditis elegans
Exon56384   374   II: 7221503-7221876 Caenorhabditis elegans
Exon56396   266   II: 7221931-7222196 Caenorhabditis elegans
Exon56408   120   II: 7222387-7222506 Caenorhabditis elegans
Exon56420   76   II: 7222561-7222636 Caenorhabditis elegans
Exon56433   96   II: 7222959-7223054 Caenorhabditis elegans
Exon56445   95   II: 7225154-7225248 Caenorhabditis elegans
Exon56459   75   II: 7225588-7225662 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:E04F6.11a.3 7217943 7225662 -1

1 Sequence

Length
3702

1 Sequence Ontology Term

Identifier Name Description
transcript