WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E04F6.11a.2 Sequence Name  E04F6.11a.2
Length (nt)  3800   Chromosome Location  II: 7217943-7225914
Chromosome . Primary Identifier  II Chromosome Location . Start  7217943
Chromosome Location . End  7225914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E04F6.11a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000530 clh-3 E04F6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E04F6.11a E04F6.11a 3006   II: 7218412-7218478

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:E04F6.11a.2 7217943 7225914 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56241   536   II: 7217943-7218478 Caenorhabditis elegans
Exon56251   245   II: 7218529-7218773 Caenorhabditis elegans
Exon56262   198   II: 7218842-7219039 Caenorhabditis elegans
Exon56274   87   II: 7219172-7219258 Caenorhabditis elegans
Exon56286   105   II: 7219304-7219408 Caenorhabditis elegans
Exon56301   92   II: 7219732-7219823 Caenorhabditis elegans
Exon56312   209   II: 7219878-7220086 Caenorhabditis elegans
Exon56324   217   II: 7220133-7220349 Caenorhabditis elegans
Exon56335   253   II: 7220399-7220651 Caenorhabditis elegans
Exon56347   279   II: 7220700-7220978 Caenorhabditis elegans
Exon56359   192   II: 7221032-7221223 Caenorhabditis elegans
Exon56371   187   II: 7221271-7221457 Caenorhabditis elegans
Exon56383   374   II: 7221503-7221876 Caenorhabditis elegans
Exon56395   266   II: 7221931-7222196 Caenorhabditis elegans
Exon56407   120   II: 7222387-7222506 Caenorhabditis elegans
Exon56419   76   II: 7222561-7222636 Caenorhabditis elegans
Exon56432   96   II: 7222959-7223054 Caenorhabditis elegans
Exon56444   95   II: 7225154-7225248 Caenorhabditis elegans
Exon56458   74   II: 7225588-7225661 Caenorhabditis elegans
Exon56460   99   II: 7225816-7225914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:E04F6.11a.2 7217943 7225914 -1

1 Sequence

Length
3800

1 Sequence Ontology Term

Identifier Name Description
transcript