WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27H5.4a.1 Sequence Name  C27H5.4a.1
Length (nt)  1712   Chromosome Location  II: 7162443-7165579
Chromosome . Primary Identifier  II Chromosome Location . Start  7162443
Chromosome Location . End  7165579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27H5.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016174 mfsd-13.2 C27H5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27H5.4a C27H5.4a 1524   II: 7162531-7162693

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C27H5.4a.1 7162443 7165579 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56078   251   II: 7162443-7162693 Caenorhabditis elegans
Exon56081   207   II: 7162751-7162957 Caenorhabditis elegans
Exon56084   87   II: 7163006-7163092 Caenorhabditis elegans
Exon56087   155   II: 7163436-7163590 Caenorhabditis elegans
Exon56090   246   II: 7163633-7163878 Caenorhabditis elegans
Exon56094   346   II: 7163923-7164268 Caenorhabditis elegans
Exon56096   110   II: 7164745-7164854 Caenorhabditis elegans
Exon56098   105   II: 7164908-7165012 Caenorhabditis elegans
Exon56100   205   II: 7165375-7165579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C27H5.4a.1 7162443 7165579 -1

1 Sequence

Length
1712

1 Sequence Ontology Term

Identifier Name Description
transcript