WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27H5.2c.1 Sequence Name  C27H5.2c.1
Length (nt)  1681   Chromosome Location  II: 7155581-7160614
Chromosome . Primary Identifier  II Chromosome Location . Start  7155581
Chromosome Location . End  7160614 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27H5.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016172 C27H5.2 C27H5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27H5.2c C27H5.2c 1476   II: 7155683-7155707

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27H5.2c.1 7155581 7160614 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56030   127   II: 7155581-7155707 Caenorhabditis elegans
Exon56034   93   II: 7157051-7157143 Caenorhabditis elegans
Exon56038   123   II: 7157867-7157989 Caenorhabditis elegans
Exon56042   126   II: 7158033-7158158 Caenorhabditis elegans
Exon56046   104   II: 7158251-7158354 Caenorhabditis elegans
Exon56050   276   II: 7158420-7158695 Caenorhabditis elegans
Exon56054   83   II: 7158742-7158824 Caenorhabditis elegans
Exon56058   103   II: 7158874-7158976 Caenorhabditis elegans
Exon56062   212   II: 7159024-7159235 Caenorhabditis elegans
Exon56066   109   II: 7159284-7159392 Caenorhabditis elegans
Exon56070   104   II: 7159509-7159612 Caenorhabditis elegans
Exon56074   221   II: 7160394-7160614 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27H5.2c.1 7155581 7160614 1

1 Sequence

Length
1681

1 Sequence Ontology Term

Identifier Name Description
transcript