WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27H5.2a.1 Sequence Name  C27H5.2a.1
Length (nt)  1785   Chromosome Location  II: 7155581-7160961
Chromosome . Primary Identifier  II Chromosome Location . Start  7155581
Chromosome Location . End  7160961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27H5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016172 C27H5.2 C27H5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27H5.2a C27H5.2a 1569   II: 7155683-7155707

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27H5.2a.1 7155581 7160961 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon56028   127   II: 7155581-7155707 Caenorhabditis elegans
Exon56032   93   II: 7157051-7157143 Caenorhabditis elegans
Exon56036   123   II: 7157867-7157989 Caenorhabditis elegans
Exon56040   126   II: 7158033-7158158 Caenorhabditis elegans
Exon56044   104   II: 7158251-7158354 Caenorhabditis elegans
Exon56048   276   II: 7158420-7158695 Caenorhabditis elegans
Exon56052   83   II: 7158742-7158824 Caenorhabditis elegans
Exon56056   103   II: 7158874-7158976 Caenorhabditis elegans
Exon56060   212   II: 7159024-7159235 Caenorhabditis elegans
Exon56064   109   II: 7159284-7159392 Caenorhabditis elegans
Exon56068   104   II: 7159509-7159612 Caenorhabditis elegans
Exon56073   70   II: 7160394-7160463 Caenorhabditis elegans
Exon56075   255   II: 7160707-7160961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27H5.2a.1 7155581 7160961 1

1 Sequence

Length
1785

1 Sequence Ontology Term

Identifier Name Description
transcript