WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52E12.4.1 Sequence Name  C52E12.4.1
Length (nt)  4897   Chromosome Location  II: 7012780-7022509
Chromosome . Primary Identifier  II Chromosome Location . Start  7012780
Chromosome Location . End  7022509 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016889 lst-6 C52E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E12.4 C52E12.4 4464   II: 7013213-7013393

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C52E12.4.1 7012780 7022509 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55582   614   II: 7012780-7013393 Caenorhabditis elegans
Exon55583   78   II: 7014228-7014305 Caenorhabditis elegans
Exon55584   94   II: 7014509-7014602 Caenorhabditis elegans
Exon55585   213   II: 7014650-7014862 Caenorhabditis elegans
Exon55586   364   II: 7014913-7015276 Caenorhabditis elegans
Exon55587   137   II: 7015335-7015471 Caenorhabditis elegans
Exon55588   122   II: 7015526-7015647 Caenorhabditis elegans
Exon55589   129   II: 7015704-7015832 Caenorhabditis elegans
Exon55590   172   II: 7016208-7016379 Caenorhabditis elegans
Exon55591   399   II: 7016674-7017072 Caenorhabditis elegans
Exon55592   97   II: 7017457-7017553 Caenorhabditis elegans
Exon55593   158   II: 7017605-7017762 Caenorhabditis elegans
Exon55594   724   II: 7017814-7018537 Caenorhabditis elegans
Exon55595   194   II: 7018615-7018808 Caenorhabditis elegans
Exon55596   634   II: 7018954-7019587 Caenorhabditis elegans
Exon55597   175   II: 7019633-7019807 Caenorhabditis elegans
Exon55598   88   II: 7020153-7020240 Caenorhabditis elegans
Exon55600   262   II: 7021607-7021868 Caenorhabditis elegans
Exon55601   159   II: 7021916-7022074 Caenorhabditis elegans
Exon55602   84   II: 7022426-7022509 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C52E12.4.1 7012780 7022509 -1

1 Sequence

Length
4897

1 Sequence Ontology Term

Identifier Name Description
transcript