WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15F1.3a.1 Sequence Name  C15F1.3a.1
Length (nt)  4663   Chromosome Location  II: 6955384-6965673
Chromosome . Primary Identifier  II Chromosome Location . Start  6955384
Chromosome Location . End  6965673 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15F1.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006605 tra-2 C15F1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15F1.3a C15F1.3a 4428   II: 6955619-6956383

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C15F1.3a.1 6955384 6965673 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55361   1000   II: 6955384-6956383 Caenorhabditis elegans
Exon55363   384   II: 6956433-6956816 Caenorhabditis elegans
Exon55366   149   II: 6956957-6957105 Caenorhabditis elegans
Exon55369   168   II: 6958952-6959119 Caenorhabditis elegans
Exon55371   103   II: 6959165-6959267 Caenorhabditis elegans
Exon55373   109   II: 6959313-6959421 Caenorhabditis elegans
Exon55375   95   II: 6961573-6961667 Caenorhabditis elegans
Exon55377   180   II: 6962012-6962191 Caenorhabditis elegans
Exon55379   74   II: 6962354-6962427 Caenorhabditis elegans
Exon55381   101   II: 6962476-6962576 Caenorhabditis elegans
Exon55383   95   II: 6962622-6962716 Caenorhabditis elegans
Exon55385   78   II: 6962762-6962839 Caenorhabditis elegans
Exon55387   97   II: 6962892-6962988 Caenorhabditis elegans
Exon55389   115   II: 6963048-6963162 Caenorhabditis elegans
Exon55391   264   II: 6963214-6963477 Caenorhabditis elegans
Exon55393   136   II: 6963536-6963671 Caenorhabditis elegans
Exon55395   681   II: 6963721-6964401 Caenorhabditis elegans
Exon55397   132   II: 6964456-6964587 Caenorhabditis elegans
Exon55399   113   II: 6964643-6964755 Caenorhabditis elegans
Exon55401   196   II: 6964811-6965006 Caenorhabditis elegans
Exon55403   97   II: 6965057-6965153 Caenorhabditis elegans
Exon55405   113   II: 6965204-6965316 Caenorhabditis elegans
Exon55407   183   II: 6965491-6965673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C15F1.3a.1 6955384 6965673 -1

1 Sequence

Length
4663

1 Sequence Ontology Term

Identifier Name Description
transcript