WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D3.6.1 Sequence Name  F22D3.6.1
Length (nt)  2042   Chromosome Location  II: 6947855-6951300
Chromosome . Primary Identifier  II Chromosome Location . Start  6947855
Chromosome Location . End  6951300 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017702 malt-1 F22D3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D3.6 F22D3.6 1920   II: 6947976-6948308

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.6.1 6947855 6951300 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon55158   454   II: 6947855-6948308 Caenorhabditis elegans
Exon55159   89   II: 6948354-6948442 Caenorhabditis elegans
Exon55160   150   II: 6948734-6948883 Caenorhabditis elegans
Exon55161   97   II: 6948957-6949053 Caenorhabditis elegans
Exon55162   115   II: 6949101-6949215 Caenorhabditis elegans
Exon55163   74   II: 6949423-6949496 Caenorhabditis elegans
Exon55164   113   II: 6949545-6949657 Caenorhabditis elegans
Exon55165   100   II: 6949706-6949805 Caenorhabditis elegans
Exon55166   224   II: 6950101-6950324 Caenorhabditis elegans
Exon55167   161   II: 6950374-6950534 Caenorhabditis elegans
Exon55168   169   II: 6950577-6950745 Caenorhabditis elegans
Exon55169   91   II: 6950905-6950995 Caenorhabditis elegans
Exon55170   82   II: 6951043-6951124 Caenorhabditis elegans
Exon55171   123   II: 6951178-6951300 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22D3.6.1 6947855 6951300 -1

1 Sequence

Length
2042

1 Sequence Ontology Term

Identifier Name Description
transcript