WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04A2.7a.1 Sequence Name  C04A2.7a.1
Length (nt)  3187   Chromosome Location  II: 6853461-6858288
Chromosome . Primary Identifier  II Chromosome Location . Start  6853461
Chromosome Location . End  6858288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A2.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001023 dnj-5 C04A2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04A2.7a C04A2.7a 2748   II: 6853884-6853990

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04A2.7a.1 6853461 6858288 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54770   530   II: 6853461-6853990 Caenorhabditis elegans
Exon54773   109   II: 6854041-6854149 Caenorhabditis elegans
Exon54775   72   II: 6854194-6854265 Caenorhabditis elegans
Exon54780   102   II: 6855253-6855354 Caenorhabditis elegans
Exon54784   168   II: 6855403-6855570 Caenorhabditis elegans
Exon54788   117   II: 6855617-6855733 Caenorhabditis elegans
Exon54792   452   II: 6855785-6856236 Caenorhabditis elegans
Exon54796   183   II: 6856283-6856465 Caenorhabditis elegans
Exon54800   367   II: 6856509-6856875 Caenorhabditis elegans
Exon54804   236   II: 6856962-6857197 Caenorhabditis elegans
Exon54808   211   II: 6857250-6857460 Caenorhabditis elegans
Exon54813   147   II: 6857506-6857652 Caenorhabditis elegans
Exon54816   168   II: 6857702-6857869 Caenorhabditis elegans
Exon54820   203   II: 6857919-6858121 Caenorhabditis elegans
Exon54825   122   II: 6858167-6858288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04A2.7a.1 6853461 6858288 -1

1 Sequence

Length
3187

1 Sequence Ontology Term

Identifier Name Description
transcript