WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04A2.3c.1 Sequence Name  C04A2.3c.1
Length (nt)  3440   Chromosome Location  II: 6840186-6847906
Chromosome . Primary Identifier  II Chromosome Location . Start  6840186
Chromosome Location . End  6847906 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A2.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001194 egl-27 C04A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04A2.3c C04A2.3c 1839   II: 6845375-6846487

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C04A2.3c.1 6840186 6847906 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54581   170   II: 6840186-6840355 Caenorhabditis elegans
Exon54600   180   II: 6840451-6840630 Caenorhabditis elegans
Exon54628   219   II: 6840692-6840910 Caenorhabditis elegans
Exon54640   229   II: 6841485-6841713 Caenorhabditis elegans
Exon54661   196   II: 6842410-6842605 Caenorhabditis elegans
Exon54684   1126   II: 6845362-6846487 Caenorhabditis elegans
Exon54714   504   II: 6846537-6847040 Caenorhabditis elegans
Exon54746   816   II: 6847091-6847906 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C04A2.3c.1 6840186 6847906 1

1 Sequence

Length
3440

1 Sequence Ontology Term

Identifier Name Description
transcript