WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04A2.3o.1 Sequence Name  C04A2.3o.1
Length (nt)  2952   Chromosome Location  II: 6837930-6847312
Chromosome . Primary Identifier  II Chromosome Location . Start  6837930
Chromosome Location . End  6847312 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04A2.3o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001194 egl-27 C04A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04A2.3o C04A2.3o 2952   II: 6837930-6837977

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C04A2.3o.1 6837930 6847312 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon54566   48   II: 6837930-6837977 Caenorhabditis elegans
Exon54580   65   II: 6838027-6838091 Caenorhabditis elegans
Exon54596   163   II: 6840193-6840355 Caenorhabditis elegans
Exon54613   180   II: 6840451-6840630 Caenorhabditis elegans
Exon54635   219   II: 6840692-6840910 Caenorhabditis elegans
Exon54654   229   II: 6841485-6841713 Caenorhabditis elegans
Exon54676   196   II: 6842410-6842605 Caenorhabditis elegans
Exon54700   1126   II: 6845362-6846487 Caenorhabditis elegans
Exon54726   504   II: 6846537-6847040 Caenorhabditis elegans
Exon54740   222   II: 6847091-6847312 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C04A2.3o.1 6837930 6847312 1

1 Sequence

Length
2952

1 Sequence Ontology Term

Identifier Name Description
transcript