WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18C5.3.1 Sequence Name  F18C5.3.1
Length (nt)  8176   Chromosome Location  II: 6536374-6554923
Chromosome . Primary Identifier  II Chromosome Location . Start  6536374
Chromosome Location . End  6554923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18C5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007050 utp-20 F18C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18C5.3 F18C5.3 7914   II: 6536384-6536458

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18C5.3.1 6536374 6554923 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53552   85   II: 6536374-6536458 Caenorhabditis elegans
Exon53553   145   II: 6536512-6536656 Caenorhabditis elegans
Exon53554   222   II: 6536700-6536921 Caenorhabditis elegans
Exon53555   109   II: 6536969-6537077 Caenorhabditis elegans
Exon53556   400   II: 6537123-6537522 Caenorhabditis elegans
Exon53557   634   II: 6537583-6538216 Caenorhabditis elegans
Exon53558   250   II: 6538267-6538516 Caenorhabditis elegans
Exon53559   518   II: 6538563-6539080 Caenorhabditis elegans
Exon53560   175   II: 6539128-6539302 Caenorhabditis elegans
Exon53561   629   II: 6539395-6540023 Caenorhabditis elegans
Exon53562   85   II: 6540069-6540153 Caenorhabditis elegans
Exon53581   184   II: 6546722-6546905 Caenorhabditis elegans
Exon53582   113   II: 6547398-6547510 Caenorhabditis elegans
Exon53583   154   II: 6547658-6547811 Caenorhabditis elegans
Exon53584   151   II: 6547855-6548005 Caenorhabditis elegans
Exon53586   584   II: 6549508-6550091 Caenorhabditis elegans
Exon53587   153   II: 6550138-6550290 Caenorhabditis elegans
Exon53588   612   II: 6550336-6550947 Caenorhabditis elegans
Exon53589   146   II: 6550995-6551140 Caenorhabditis elegans
Exon53590   157   II: 6551812-6551968 Caenorhabditis elegans
Exon53591   1263   II: 6552018-6553280 Caenorhabditis elegans
Exon53592   183   II: 6553331-6553513 Caenorhabditis elegans
Exon53593   140   II: 6553566-6553705 Caenorhabditis elegans
Exon53594   409   II: 6553753-6554161 Caenorhabditis elegans
Exon53595   115   II: 6554205-6554319 Caenorhabditis elegans
Exon53596   560   II: 6554364-6554923 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18C5.3.1 6536374 6554923 1

1 Sequence

Length
8176

1 Sequence Ontology Term

Identifier Name Description
transcript