WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56E6.3a.1 Sequence Name  C56E6.3a.1
Length (nt)  2284   Chromosome Location  II: 6517188-6521375
Chromosome . Primary Identifier  II Chromosome Location . Start  6517188
Chromosome Location . End  6521375 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56E6.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016971 toe-2 C56E6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56E6.3a C56E6.3a 1866   II: 6517411-6517521

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C56E6.3a.1 6517188 6521375 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53476   334   II: 6517188-6517521 Caenorhabditis elegans
Exon53480   130   II: 6517570-6517699 Caenorhabditis elegans
Exon53484   116   II: 6517813-6517928 Caenorhabditis elegans
Exon53488   633   II: 6518008-6518640 Caenorhabditis elegans
Exon53492   376   II: 6518689-6519064 Caenorhabditis elegans
Exon53496   331   II: 6519118-6519448 Caenorhabditis elegans
Exon53500   176   II: 6519493-6519668 Caenorhabditis elegans
Exon53504   188   II: 6521188-6521375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C56E6.3a.1 6517188 6521375 -1

1 Sequence

Length
2284

1 Sequence Ontology Term

Identifier Name Description
transcript