WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28D9.3d.1 Sequence Name  T28D9.3d.1
Length (nt)  1311   Chromosome Location  II: 6485476-6488810
Chromosome . Primary Identifier  II Chromosome Location . Start  6485476
Chromosome Location . End  6488810 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28D9.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020895 plpp-1.2 T28D9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28D9.3d T28D9.3d 1077   II: 6485714-6485791

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28D9.3d.1 6485476 6488810 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon53326   88   II: 6485476-6485563 Caenorhabditis elegans
Exon53328   164   II: 6485628-6485791 Caenorhabditis elegans
Exon53335   85   II: 6486851-6486935 Caenorhabditis elegans
Exon53342   149   II: 6487556-6487704 Caenorhabditis elegans
Exon53349   118   II: 6487752-6487869 Caenorhabditis elegans
Exon53356   136   II: 6487914-6488049 Caenorhabditis elegans
Exon53364   112   II: 6488098-6488209 Caenorhabditis elegans
Exon53370   180   II: 6488257-6488436 Caenorhabditis elegans
Exon53377   100   II: 6488487-6488586 Caenorhabditis elegans
Exon53384   179   II: 6488632-6488810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28D9.3d.1 6485476 6488810 1

1 Sequence

Length
1311

1 Sequence Ontology Term

Identifier Name Description
transcript