WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55C12.1a Sequence Name  F55C12.1a
Length (nt)  1365   Chromosome Location  II: 5890496-5890651
Chromosome . Primary Identifier  II Chromosome Location . Start  5890496
Chromosome Location . End  5890651
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C12.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02770 RFIP-1, isoform a 52.0 454 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00048460
WBRNAi00091242
WBRNAi00032858
WBRNAi00015702
WBRNAi00091243
WBRNAi00090862

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F55C12.1a 5890496 5890651 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018869 rfip-1 F55C12.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F55C12.1a 5890496 5890651 1
CDS:F55C12.1a 5890887 5891551 1
CDS:F55C12.1a 5891599 5891777 1
CDS:F55C12.1a 5891863 5892227 1

1 Sequence

Length
1365

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55C12.1a.1 F55C12.1a.1 1486   II: 5884552-5892227
Transcript:F55C12.1a.3 F55C12.1a.3 1516   II: 5886355-5892227
Transcript:F55C12.1a.2 F55C12.1a.2 1374   II: 5890487-5892227