WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C12.5b.1 Sequence Name  F55C12.5b.1
Length (nt)  3248   Chromosome Location  II: 5867254-5873614
Chromosome . Primary Identifier  II Chromosome Location . Start  5867254
Chromosome Location . End  5873614 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C12.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018872 tex-2 F55C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C12.5b F55C12.5b 2778   II: 5867673-5867880

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55C12.5b.1 5867254 5873614 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51697   627   II: 5867254-5867880 Caenorhabditis elegans
Exon51698   107   II: 5868022-5868128 Caenorhabditis elegans
Exon51699   312   II: 5868178-5868489 Caenorhabditis elegans
Exon51700   456   II: 5868541-5868996 Caenorhabditis elegans
Exon51701   163   II: 5869041-5869203 Caenorhabditis elegans
Exon51702   722   II: 5869252-5869973 Caenorhabditis elegans
Exon51703   522   II: 5870021-5870542 Caenorhabditis elegans
Exon51704   123   II: 5870588-5870710 Caenorhabditis elegans
Exon51705   143   II: 5873340-5873482 Caenorhabditis elegans
Exon51706   73   II: 5873542-5873614 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55C12.5b.1 5867254 5873614 -1

1 Sequence

Length
3248

1 Sequence Ontology Term

Identifier Name Description
transcript