WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05F1.6c.1 Sequence Name  K05F1.6c.1
Length (nt)  3325   Chromosome Location  II: 5782520-5787675
Chromosome . Primary Identifier  II Chromosome Location . Start  5782520
Chromosome Location . End  5787675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05F1.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019408 K05F1.6 K05F1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05F1.6c K05F1.6c 2577   II: 5782948-5783195

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05F1.6c.1 5782520 5787675 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51415   374   II: 5782520-5782893 Caenorhabditis elegans
Exon51420   253   II: 5782943-5783195 Caenorhabditis elegans
Exon51424   228   II: 5783702-5783929 Caenorhabditis elegans
Exon51428   271   II: 5784061-5784331 Caenorhabditis elegans
Exon51431   135   II: 5784941-5785075 Caenorhabditis elegans
Exon51434   132   II: 5785119-5785250 Caenorhabditis elegans
Exon51438   131   II: 5785303-5785433 Caenorhabditis elegans
Exon51442   170   II: 5785482-5785651 Caenorhabditis elegans
Exon51446   110   II: 5785698-5785807 Caenorhabditis elegans
Exon51450   228   II: 5785854-5786081 Caenorhabditis elegans
Exon51454   251   II: 5786187-5786437 Caenorhabditis elegans
Exon51458   370   II: 5786486-5786855 Caenorhabditis elegans
Exon51462   131   II: 5786907-5787037 Caenorhabditis elegans
Exon51466   79   II: 5787084-5787162 Caenorhabditis elegans
Exon51471   462   II: 5787214-5787675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05F1.6c.1 5782520 5787675 1

1 Sequence

Length
3325

1 Sequence Ontology Term

Identifier Name Description
transcript