WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18A3.5a.1 Sequence Name  C18A3.5a.1
Length (nt)  1734   Chromosome Location  II: 5712351-5714823
Chromosome . Primary Identifier  II Chromosome Location . Start  5712351
Chromosome Location . End  5714823 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18A3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015943 tiar-1 C18A3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18A3.5a C18A3.5a 1227   II: 5712840-5713124

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C18A3.5a.1 5712351 5714823 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51258   774   II: 5712351-5713124 Caenorhabditis elegans
Exon51260   185   II: 5713171-5713355 Caenorhabditis elegans
Exon51263   421   II: 5713434-5713854 Caenorhabditis elegans
Exon51266   96   II: 5714062-5714157 Caenorhabditis elegans
Exon51269   97   II: 5714494-5714590 Caenorhabditis elegans
Exon51272   161   II: 5714663-5714823 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C18A3.5a.1 5712351 5714823 -1

1 Sequence

Length
1734

1 Sequence Ontology Term

Identifier Name Description
transcript